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Citation Management Tools

Using bibliographic management or citation management software will help organize your research. With a few clicks of a mouse create bibliographies and save time formatting your manuscript.

Citation Management with EndNote X9

EndNote X9 features include the ability to:

  • Insert in-text citations and create bibliographies with Cite While You Write (CWYW).
  • Rapidly import database files.
  • Sync to EndNote Online.
  • Share libraries.
  • Customize citation styles.

EndNote is available to Thomas Jefferson University faculty, students and staff; Jefferson Hospitals: TJUH, JHN and Methodist clinicians and staff;  and Jefferson residents, postdocs and fellows.

Compatibility

Configuring EndNote Preferences and Downloading PDFs

Jefferson Libraries has transitioned from EZproxy to OpenAthens authentication for access to journal articles. EndNote Desktop is not supported by OpenAthens and only the OpenURL Path may be added via Preferences (Authenticate with: URL: input field is now left empty).

To attach a PDF to a citation manager (during or after the import process), you’ll need to configure the citation manager tool with the library’s OpenURL  (https://jefferson.primo.exlibrisgroup.com/openurl/01TJU_INST/01TJU_INST:01TJU?):

  1. Open EndNote
  2. On the Edit menu (EndNote on Mac), select Preferences
  3. Select Find Full Text
  4. Paste the OpenURL (above) into the box labeled OpenURL Path
  5. Select Apply and then OK to save changes

EndNote Find Full Text preferences

Please note: without the Authenticate with: URL: EndNote's Find Full Text is not totally functional at this time (we hope for an eventual fix) as it is only relying upon the OpenURL to import PDFs. 

Alternative options (PDFs must have embedded digital object identifiers to be successfully imported):

Sharing Libraries

Backup & Library Safety

Finders